Preheat oven to 325 degrees. Grease the cups of a jumbo muffin tin. The individual muffin cups in my pan were 1.5 inches deep, 3 inches wide on top, and 2.5 inch wide on bottom. Cooking time will vary based on the size of your muffin tin size.
Mix the almond flour, coconut flour, salt, and baking soda together in a large bowl.
In another bowl, mix the melted coconut oil, mashed avocado, maple syrup, and honey with a hand-held electric mixer. Add the egg, egg yolk, and vanilla to the bowl and mix. Add the dry ingredients to the bowl and mix until just mixed. Fold in the chocolate chips.
Put 2 Tbs of the batter into each muffin tin, and push down on it using the back of a spoon.
Cook the muffins for about 11-13 minutes, until slightly golden and firm along the sides. Remove them from the oven, and leave them in the pan for about 3 minutes
Then remove the cookie cake cupcakes from the pan and cool on a wire rack. Once cooled, you can top with the Paleo Chocolate Ganache.